Elise Pendall

2021

DOI bib abs
Author Correction: The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data
Gilberto Pastorello, Carlo Trotta, Eleonora Canfora, Housen Chu, Danielle Christianson, You-Wei Cheah, C. Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Markus Reichstein, Alessio Ribeca, Catharine van Ingen, Nicolas Vuichard, Leiming Zhang, B. D. Amiro, Christof Ammann, M. Altaf Arain, Jonas Ardö, Timothy J. Arkebauer, Stefan K. Arndt, Nicola Arriga, Marc Aubinet, Mika Aurela, Dennis Baldocchi, Alan Barr, Eric Beamesderfer, Luca Belelli Marchesini, Onil Bergeron, Jason Beringer, Christian Bernhofer, Daniel Berveiller, D. P. Billesbach, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Julia Boike, Paul V. Bolstad, Damien Bonal, Jean-Marc Bonnefond, D. R. Bowling, Rosvel Bracho, Jason Brodeur, Christian Brümmer, Nina Buchmann, Benoît Burban, Sean P. Burns, Pauline Buysse, Peter Cale, M. Cavagna, Pierre Cellier, Shiping Chen, Isaac Chini, Torben R. Christensen, James Cleverly, Alessio Collalti, Claudia Consalvo, Bruce D. Cook, David Cook, Carole Coursolle, Edoardo Cremonese, Peter S. Curtis, Ettore D’Andrea, Humberto da Rocha, Xiaoqin Dai, K. J. Davis, Bruno De Cinti, A. de Grandcourt, Anne De Ligne, Raimundo Cosme de Oliveira, Nicolas Delpierre, Ankur R. Desai, Carlos Marcelo Di Bella, Paul Di Tommasi, A. J. Dolman, Francisco Domingo, Gang Dong, Sabina Dore, Pierpaolo Duce, Éric Dufrêne, Allison L. Dunn, Jiří Dušek, Derek Eamus, Uwe Eichelmann, Hatim Abdalla M. ElKhidir, Werner Eugster, Cäcilia Ewenz, B. E. Ewers, D. Famulari, Silvano Fares, Iris Feigenwinter, Andrew Feitz, Rasmus Fensholt, Gianluca Filippa, M. L. Fischer, J. M. Frank, Marta Galvagno, Mana Gharun, Damiano Gianelle, Bert Gielen, Beniamino Gioli, Anatoly A. Gitelson, Ignacio Goded, Mathias Goeckede, A. H. Goldstein, Christopher M. Gough, Michael L. Goulden, Alexander Graf, Anne Griebel, Carsten Gruening, Thomas Grünwald, Albin Hammerle, Shijie Han, Xingguo Han, Birger Ulf Hansen, Chad Hanson, Juha Hatakka, Yongtao He, Markus Hehn, Bernard Heinesch, Nina Hinko‐Najera, Lukas Hörtnagl, Lindsay B. Hutley, Andreas Ibrom, Hiroki Ikawa, M. Jackowicz-Korczyński, Dalibor Janouš, W.W.P. Jans, Rachhpal S. Jassal, Shicheng Jiang, Tomomichi Kato, Myroslava Khomik, Janina Klatt, Alexander Knohl, Sara Knox, Hideki Kobayashi, Georgia R. Koerber, Olaf Kolle, Yoshiko Kosugi, Ayumi Kotani, Andrew S. Kowalski, Bart Kruijt, Julia Kurbatova, Werner L. Kutsch, Hyojung Kwon, Samuli Launiainen, Tuomas Laurila, B. E. Law, R. Leuning, Yingnian Li, Michael J. Liddell, Jean‐Marc Limousin, Marryanna Lion, Adam Liska, Annalea Lohila, Ana López‐Ballesteros, Efrèn López‐Blanco, Benjamin Loubet, Denis Loustau, Antje Lucas-Moffat, Johannes Lüers, Siyan Ma, Craig Macfarlane, Vincenzo Magliulo, Regine Maier, Ivan Mammarella, Giovanni Manca, Barbara Marcolla, Hank A. Margolis, Serena Marras, W. J. Massman, Mikhail Mastepanov, Roser Matamala, Jaclyn Hatala Matthes, Francesco Mazzenga, Harry McCaughey, Ian McHugh, Andrew M. S. McMillan, Lutz Merbold, Wayne S. Meyer, Tilden P. Meyers, S. D. Miller, Stefano Minerbi, Uta Moderow, Russell K. Monson, Leonardo Montagnani, Caitlin E. Moore, E.J. Moors, Virginie Moreaux, Christine Moureaux, J. William Munger, T. Nakai, Johan Neirynck, Zoran Nesic, Giacomo Nicolini, Asko Noormets, Matthew Northwood, Marcelo D. Nosetto, Yann Nouvellon, Kimberly A. Novick, Walter C. Oechel, Jørgen E. Olesen, Jean‐Marc Ourcival, S. A. Papuga, Frans‐Jan W. Parmentier, Eugénie Paul‐Limoges, Marian Pavelka, Matthias Peichl, Elise Pendall, Richard P. Phillips, Kim Pilegaard, Norbert Pirk, Gabriela Posse, Thomas L. Powell, Heiko Prasse, Suzanne M. Prober, Serge Rambal, Üllar Rannik, Naama Raz‐Yaseef, Corinna Rebmann, David E. Reed, Víctor Resco de Dios, Natalia Restrepo‐Coupé, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, S. R. Saleska, Enrique P. Sánchez‐Cañete, Zulia Mayari Sánchez-Mejía, Hans Peter Schmid, Marius Schmidt, Karl Schneider, Frederik Schrader, Ivan Schroder, Russell L. Scott, Pavel Sedlák, Penélope Serrano-Ortíz, Changliang Shao, Peili Shi, Ivan Shironya, Lukas Siebicke, Ladislav Šigut, Richard Silberstein, Costantino Sirca, Donatella Spano, R. Steinbrecher, Robert M. Stevens, Cove Sturtevant, Andy Suyker, Torbern Tagesson, Satoru Takanashi, Yanhong Tang, Nigel Tapper, Jonathan E. Thom, Michele Tomassucci, Juha‐Pekka Tuovinen, S. P. Urbanski, Riccardo Valentini, M. K. van der Molen, Eva van Gorsel, J. van Huissteden, Andrej Varlagin, Joseph Verfaillie, Timo Vesala, Caroline Vincke, Domenico Vitale, N. N. Vygodskaya, Jeffrey P. Walker, Elizabeth A. Walter‐Shea, Huimin Wang, R. J. Weber, Sebastian Westermann, Christian Wille, Steven C. Wofsy, Georg Wohlfahrt, Sebastian Wolf, William Woodgate, Yuelin Li, Roberto Zampedri, Yuanman Hu, Guoyi Zhou, Donatella Zona, D. Agarwal, Sébastien Biraud, Margaret Torn, Dario Papale, Gilberto Pastorello, Carlo Trotta, Eleonora Canfora, Housen Chu, Danielle Christianson, You-Wei Cheah, C. Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Markus Reichstein, Alessio Ribeca, Catharine van Ingen, Nicolas Vuichard, Leiming Zhang, B. D. Amiro, Christof Ammann, M. Altaf Arain, Jonas Ardö, Timothy J. Arkebauer, Stefan K. Arndt, Nicola Arriga, Marc Aubinet, Mika Aurela, Dennis Baldocchi, Alan Barr, Eric Beamesderfer, Luca Belelli Marchesini, Onil Bergeron, Jason Beringer, Christian Bernhofer, Daniel Berveiller, D. P. Billesbach, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Julia Boike, Paul V. Bolstad, Damien Bonal, Jean-Marc Bonnefond, D. R. Bowling, Rosvel Bracho, Jason Brodeur, Christian Brümmer, Nina Buchmann, Benoît Burban, Sean P. Burns, Pauline Buysse, Peter Cale, M. Cavagna, Pierre Cellier, Shiping Chen, Isaac Chini, Torben R. Christensen, James Cleverly, Alessio Collalti, Claudia Consalvo, Bruce D. Cook, David Cook, Carole Coursolle, Edoardo Cremonese, Peter S. Curtis, Ettore D’Andrea, Humberto da Rocha, Xiaoqin Dai, K. J. Davis, Bruno De Cinti, A. de Grandcourt, Anne De Ligne, Raimundo Cosme de Oliveira, Nicolas Delpierre, Ankur R. Desai, Carlos Marcelo Di Bella, Paul Di Tommasi, A. J. Dolman, Francisco Domingo, Gang Dong, Sabina Dore, Pierpaolo Duce, Éric Dufrêne, Allison L. Dunn, Jiří Dušek, Derek Eamus, Uwe Eichelmann, Hatim Abdalla M. ElKhidir, Werner Eugster, Cäcilia Ewenz, B. E. Ewers, D. Famulari, Silvano Fares, Iris Feigenwinter, Andrew Feitz, Rasmus Fensholt, Gianluca Filippa, M. L. Fischer, J. M. Frank, Marta Galvagno, Mana Gharun, Damiano Gianelle, Bert Gielen, Beniamino Gioli, Anatoly A. Gitelson, Ignacio Goded, Mathias Goeckede, A. H. Goldstein, Christopher M. Gough, Michael L. Goulden, Alexander Graf, Anne Griebel, Carsten Gruening, Thomas Grünwald, Albin Hammerle, Shijie Han, Xingguo Han, Birger Ulf Hansen, Chad Hanson, Juha Hatakka, Yongtao He, Markus Hehn, Bernard Heinesch, Nina Hinko‐Najera, Lukas Hörtnagl, Lindsay B. Hutley, Andreas Ibrom, Hiroki Ikawa, M. Jackowicz-Korczyński, Dalibor Janouš, W.W.P. Jans, Rachhpal S. Jassal, Shicheng Jiang, Tomomichi Kato, Myroslava Khomik, Janina Klatt, Alexander Knohl, Sara Knox, Hideki Kobayashi, Georgia R. Koerber, Olaf Kolle, Yoshiko Kosugi, Ayumi Kotani, Andrew S. Kowalski, Bart Kruijt, Julia Kurbatova, Werner L. Kutsch, Hyojung Kwon, Samuli Launiainen, Tuomas Laurila, B. E. Law, R. Leuning, Yingnian Li, Michael J. Liddell, Jean‐Marc Limousin, Marryanna Lion, Adam Liska, Annalea Lohila, Ana López‐Ballesteros, Efrèn López‐Blanco, Benjamin Loubet, Denis Loustau, Antje Lucas-Moffat, Johannes Lüers, Siyan Ma, Craig Macfarlane, Vincenzo Magliulo, Regine Maier, Ivan Mammarella, Giovanni Manca, Barbara Marcolla, Hank A. Margolis, Serena Marras, W. J. Massman, Mikhail Mastepanov, Roser Matamala, Jaclyn Hatala Matthes, Francesco Mazzenga, Harry McCaughey, Ian McHugh, Andrew M. S. McMillan, Lutz Merbold, Wayne S. Meyer, Tilden P. Meyers, S. D. Miller, Stefano Minerbi, Uta Moderow, Russell K. Monson, Leonardo Montagnani, Caitlin E. Moore, E.J. Moors, Virginie Moreaux, Christine Moureaux, J. William Munger, T. Nakai, Johan Neirynck, Zoran Nesic, Giacomo Nicolini, Asko Noormets, Matthew Northwood, Marcelo D. Nosetto, Yann Nouvellon, Kimberly A. Novick, Walter C. Oechel, Jørgen E. Olesen, Jean‐Marc Ourcival, S. A. Papuga, Frans‐Jan W. Parmentier, Eugénie Paul‐Limoges, Marian Pavelka, Matthias Peichl, Elise Pendall, Richard P. Phillips, Kim Pilegaard, Norbert Pirk, Gabriela Posse, Thomas L. Powell, Heiko Prasse, Suzanne M. Prober, Serge Rambal, Üllar Rannik, Naama Raz‐Yaseef, Corinna Rebmann, David E. Reed, Víctor Resco de Dios, Natalia Restrepo‐Coupé, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, S. R. Saleska, Enrique P. Sánchez‐Cañete, Zulia Mayari Sánchez-Mejía, Hans Peter Schmid, Marius Schmidt, Karl Schneider, Frederik Schrader, Ivan Schroder, Russell L. Scott, Pavel Sedlák, Penélope Serrano-Ortíz, Changliang Shao, Peili Shi, Ivan Shironya, Lukas Siebicke, Ladislav Šigut, Richard Silberstein, Costantino Sirca, Donatella Spano, R. Steinbrecher, Robert M. Stevens, Cove Sturtevant, Andy Suyker, Torbern Tagesson, Satoru Takanashi, Yanhong Tang, Nigel Tapper, Jonathan E. Thom, Michele Tomassucci, Juha‐Pekka Tuovinen, S. P. Urbanski, Riccardo Valentini, M. K. van der Molen, Eva van Gorsel, J. van Huissteden, Andrej Varlagin, Joseph Verfaillie, Timo Vesala, Caroline Vincke, Domenico Vitale, N. N. Vygodskaya, Jeffrey P. Walker, Elizabeth A. Walter‐Shea, Huimin Wang, R. J. Weber, Sebastian Westermann, Christian Wille, Steven C. Wofsy, Georg Wohlfahrt, Sebastian Wolf, William Woodgate, Yuelin Li, Roberto Zampedri, Yuanman Hu, Guoyi Zhou, Donatella Zona, D. Agarwal, Sébastien Biraud, Margaret Torn, Dario Papale
Scientific Data, Volume 8, Issue 1

A Correction to this paper has been published: https://doi.org/10.1038/s41597-021-00851-9.

DOI bib abs
Representativeness of Eddy-Covariance flux footprints for areas surrounding AmeriFlux sites
Housen Chu, Xiangzhong Luo, Zutao Ouyang, Stephen Chan, Sigrid Dengel, Sébastien Biraud, Margaret Torn, Stefan Metzger, Jitendra Kumar, M. Altaf Arain, T. J. Arkebauer, Dennis Baldocchi, Carl J. Bernacchi, D. P. Billesbach, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Rosvel Bracho, S. M. Brown, N. A. Brunsell, Jiquan Chen, Xingyuan Chen, Kenneth L. Clark, Ankur R. Desai, Tomer Duman, David Durden, Silvano Fares, Inke Forbrich, John A. Gamon, Christopher M. Gough, Timothy J. Griffis, Manuel Helbig, David Y. Hollinger, Elyn Humphreys, Hiroki Ikawa, Hiroki Iwata, Yang Ju, John F. Knowles, Sara Knox, Hideki Kobayashi, Thomas E. Kolb, B. E. Law, Xuhui Lee, M. E. Litvak, Heping Liu, J. William Munger, Asko Noormets, Kim Novick, Steven F. Oberbauer, Walter C. Oechel, Patricia Y. Oikawa, S. A. Papuga, Elise Pendall, Prajaya Prajapati, John H. Prueger, W. L. Quinton, Andrew D. Richardson, Eric S. Russell, Russell L. Scott, Gregory Starr, R. M. Staebler, Paul C. Stoy, Ellen Stuart‐Haëntjens, Oliver Sonnentag, Ryan C. Sullivan, Andy Suyker, Masahito Ueyama, Rodrigo Vargas, Jeffrey D. Wood, Donatella Zona, Housen Chu, Xiangzhong Luo, Zutao Ouyang, Stephen Chan, Sigrid Dengel, Sébastien Biraud, Margaret Torn, Stefan Metzger, Jitendra Kumar, M. Altaf Arain, T. J. Arkebauer, Dennis Baldocchi, Carl J. Bernacchi, D. P. Billesbach, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Rosvel Bracho, S. M. Brown, N. A. Brunsell, Jiquan Chen, Xingyuan Chen, Kenneth L. Clark, Ankur R. Desai, Tomer Duman, David Durden, Silvano Fares, Inke Forbrich, John A. Gamon, Christopher M. Gough, Timothy J. Griffis, Manuel Helbig, David Y. Hollinger, Elyn Humphreys, Hiroki Ikawa, Hiroki Iwata, Yang Ju, John F. Knowles, Sara Knox, Hideki Kobayashi, Thomas E. Kolb, B. E. Law, Xuhui Lee, M. E. Litvak, Heping Liu, J. William Munger, Asko Noormets, Kim Novick, Steven F. Oberbauer, Walter C. Oechel, Patricia Y. Oikawa, S. A. Papuga, Elise Pendall, Prajaya Prajapati, John H. Prueger, W. L. Quinton, Andrew D. Richardson, Eric S. Russell, Russell L. Scott, Gregory Starr, R. M. Staebler, Paul C. Stoy, Ellen Stuart‐Haëntjens, Oliver Sonnentag, Ryan C. Sullivan, Andy Suyker, Masahito Ueyama, Rodrigo Vargas, Jeffrey D. Wood, Donatella Zona
Agricultural and Forest Meteorology, Volume 301-302

• Large-scale eddy-covariance flux datasets need to be used with footprint-awareness • Using a fixed-extent target area across sites can bias model-data integration • Most sites do not represent the dominant land-cover type at a larger spatial extent • A representativeness index provides general guidance for site selection and data use Large datasets of greenhouse gas and energy surface-atmosphere fluxes measured with the eddy-covariance technique (e.g., FLUXNET2015, AmeriFlux BASE) are widely used to benchmark models and remote-sensing products. This study addresses one of the major challenges facing model-data integration: To what spatial extent do flux measurements taken at individual eddy-covariance sites reflect model- or satellite-based grid cells? We evaluate flux footprints—the temporally dynamic source areas that contribute to measured fluxes—and the representativeness of these footprints for target areas (e.g., within 250–3000 m radii around flux towers) that are often used in flux-data synthesis and modeling studies. We examine the land-cover composition and vegetation characteristics, represented here by the Enhanced Vegetation Index (EVI), in the flux footprints and target areas across 214 AmeriFlux sites, and evaluate potential biases as a consequence of the footprint-to-target-area mismatch. Monthly 80% footprint climatologies vary across sites and through time ranging four orders of magnitude from 10 3 to 10 7 m 2 due to the measurement heights, underlying vegetation- and ground-surface characteristics, wind directions, and turbulent state of the atmosphere. Few eddy-covariance sites are located in a truly homogeneous landscape. Thus, the common model-data integration approaches that use a fixed-extent target area across sites introduce biases on the order of 4%–20% for EVI and 6%–20% for the dominant land cover percentage. These biases are site-specific functions of measurement heights, target area extents, and land-surface characteristics. We advocate that flux datasets need to be used with footprint awareness, especially in research and applications that benchmark against models and data products with explicit spatial information. We propose a simple representativeness index based on our evaluations that can be used as a guide to identify site-periods suitable for specific applications and to provide general guidance for data use.

2020

DOI bib abs
The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data
Gilberto Pastorello, Carlo Trotta, Eleonora Canfora, Housen Chu, Danielle Christianson, You-Wei Cheah, C. Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Markus Reichstein, Alessio Ribeca, Catharine van Ingen, Nicolas Vuichard, Leiming Zhang, B. D. Amiro, Christof Ammann, M. Altaf Arain, Jonas Ardö, Timothy J. Arkebauer, Stefan K. Arndt, Nicola Arriga, Marc Aubinet, Mika Aurela, Dennis Baldocchi, Alan Barr, Eric Beamesderfer, Luca Belelli Marchesini, Onil Bergeron, Jason Beringer, Christian Bernhofer, Daniel Berveiller, D. P. Billesbach, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Julia Boike, Paul V. Bolstad, Damien Bonal, Jean-Marc Bonnefond, D. R. Bowling, Rosvel Bracho, Jason Brodeur, Christian Brümmer, Nina Buchmann, Benoît Burban, Sean P. Burns, Pauline Buysse, Peter Cale, M. Cavagna, Pierre Cellier, Shiping Chen, Isaac Chini, Torben R. Christensen, James Cleverly, Alessio Collalti, Claudia Consalvo, Bruce D. Cook, David Cook, Carole Coursolle, Edoardo Cremonese, Peter S. Curtis, Ettore D’Andrea, Humberto da Rocha, Xiaoqin Dai, K. J. Davis, Bruno De Cinti, A. de Grandcourt, Anne De Ligne, Raimundo Cosme de Oliveira, Nicolas Delpierre, Ankur R. Desai, Carlos Marcelo Di Bella, Paul Di Tommasi, A. J. Dolman, Francisco Domingo, Gang Dong, Sabina Dore, Pierpaolo Duce, Éric Dufrêne, Allison L. Dunn, Jiří Dušek, Derek Eamus, Uwe Eichelmann, Hatim Abdalla M. ElKhidir, Werner Eugster, Cäcilia Ewenz, B. E. Ewers, D. Famulari, Silvano Fares, Iris Feigenwinter, Andrew Feitz, Rasmus Fensholt, Gianluca Filippa, M. L. Fischer, J. M. Frank, Marta Galvagno, Mana Gharun, Damiano Gianelle, Bert Gielen, Beniamino Gioli, Anatoly A. Gitelson, Ignacio Goded, Mathias Goeckede, A. H. Goldstein, Christopher M. Gough, Michael L. Goulden, Alexander Graf, Anne Griebel, Carsten Gruening, Thomas Grünwald, Albin Hammerle, Shijie Han, Xingguo Han, Birger Ulf Hansen, Chad Hanson, Juha Hatakka, Yongtao He, Markus Hehn, Bernard Heinesch, Nina Hinko‐Najera, Lukas Hörtnagl, Lindsay B. Hutley, Andreas Ibrom, Hiroki Ikawa, M. Jackowicz-Korczyński, Dalibor Janouš, W.W.P. Jans, Rachhpal S. Jassal, Shicheng Jiang, Tomomichi Kato, Myroslava Khomik, Janina Klatt, Alexander Knohl, Sara Knox, Hideki Kobayashi, Georgia R. Koerber, Olaf Kolle, Yoshiko Kosugi, Ayumi Kotani, Andrew S. Kowalski, Bart Kruijt, Julia Kurbatova, Werner L. Kutsch, Hyojung Kwon, Samuli Launiainen, Tuomas Laurila, B. E. Law, R. Leuning, Yingnian Li, Michael J. Liddell, Jean‐Marc Limousin, Marryanna Lion, Adam Liska, Annalea Lohila, Ana López‐Ballesteros, Efrèn López‐Blanco, Benjamin Loubet, Denis Loustau, Antje Lucas-Moffat, Johannes Lüers, Siyan Ma, Craig Macfarlane, Vincenzo Magliulo, Regine Maier, Ivan Mammarella, Giovanni Manca, Barbara Marcolla, Hank A. Margolis, Serena Marras, W. J. Massman, Mikhail Mastepanov, Roser Matamala, Jaclyn Hatala Matthes, Francesco Mazzenga, Harry McCaughey, Ian McHugh, Andrew M. S. McMillan, Lutz Merbold, Wayne S. Meyer, Tilden P. Meyers, S. D. Miller, Stefano Minerbi, Uta Moderow, Russell K. Monson, Leonardo Montagnani, Caitlin E. Moore, E.J. Moors, Virginie Moreaux, Christine Moureaux, J. William Munger, T. Nakai, Johan Neirynck, Zoran Nesic, Giacomo Nicolini, Asko Noormets, Matthew Northwood, Marcelo D. Nosetto, Yann Nouvellon, Kimberly A. Novick, Walter C. Oechel, Jørgen E. Olesen, Jean‐Marc Ourcival, S. A. Papuga, Frans‐Jan W. Parmentier, Eugénie Paul‐Limoges, Marian Pavelka, Matthias Peichl, Elise Pendall, Richard P. Phillips, Kim Pilegaard, Norbert Pirk, Gabriela Posse, Thomas L. Powell, Heiko Prasse, Suzanne M. Prober, Serge Rambal, Üllar Rannik, Naama Raz‐Yaseef, Corinna Rebmann, David E. Reed, Víctor Resco de Dios, Natalia Restrepo‐Coupé, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, S. R. Saleska, Enrique P. Sánchez‐Cañete, Zulia Mayari Sánchez-Mejía, Hans Peter Schmid, Marius Schmidt, Karl Schneider, Frederik Schrader, Ivan Schroder, Russell L. Scott, Pavel Sedlák, Penélope Serrano-Ortíz, Changliang Shao, Peili Shi, Ivan Shironya, Lukas Siebicke, Ladislav Šigut, Richard Silberstein, Costantino Sirca, Donatella Spano, R. Steinbrecher, Robert M. Stevens, Cove Sturtevant, Andy Suyker, Torbern Tagesson, Satoru Takanashi, Yanhong Tang, Nigel Tapper, Jonathan E. Thom, Michele Tomassucci, Juha‐Pekka Tuovinen, S. P. Urbanski, Riccardo Valentini, M. K. van der Molen, Eva van Gorsel, J. van Huissteden, Andrej Varlagin, Joseph Verfaillie, Timo Vesala, Caroline Vincke, Domenico Vitale, N. N. Vygodskaya, Jeffrey P. Walker, Elizabeth A. Walter‐Shea, Huimin Wang, R. J. Weber, Sebastian Westermann, Christian Wille, Steven C. Wofsy, Georg Wohlfahrt, Sebastian Wolf, William Woodgate, Yuelin Li, Roberto Zampedri, Yuanman Hu, Guoyi Zhou, Donatella Zona, D. Agarwal, Sébastien Biraud, Margaret Torn, Dario Papale
Scientific Data, Volume 7, Issue 1

Abstract The FLUXNET2015 dataset provides ecosystem-scale data on CO 2 , water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

DOI bib abs
COSORE: A community database for continuous soil respiration and other soil‐atmosphere greenhouse gas flux data
Ben Bond‐Lamberty, Danielle Christianson, Avni Malhotra, Stephanie Pennington, Debjani Sihi, Amir AghaKouchak, Hassan Anjileli, M. Altaf Arain, Juan J. Armestó, Samaneh Ashraf, Mioko Ataka, Dennis Baldocchi, T. Andrew Black, Nina Buchmann, Mariah S. Carbone, Shih‐Chieh Chang, P. M. Crill, Peter S. Curtis, Eric A. Davidson, Ankur R. Desai, John E. Drake, Tarek S. El‐Madany, Michael Gavazzi, Carolyn‐Monika Görres, Christopher M. Gough, Michael L. Goulden, Jillian W. Gregg, Omar Gutiérrez del Arroyo, Jin He, Takashi Hirano, Anya M. Hopple, Holly Hughes, Järvi Järveoja, Rachhpal S. Jassal, Jinshi Jian, Haiming Kan, Jason P. Kaye, Yuji Kominami, Naishen Liang, David A. Lipson, Catriona A. Macdonald, Kadmiel Maseyk, Kayla Mathes, Marguerite Mauritz, Melanie A. Mayes, Steven G. McNulty, Guofang Miao, Mirco Migliavacca, S. D. Miller, Chelcy Ford Miniat, Jennifer Goedhart Nietz, Mats B. Nilsson, Asko Noormets, H. Norouzi, Christine S. O’Connell, Bruce Osborne, Cecilio Oyonarte, Zhuo Pang, Matthias Peichl, Elise Pendall, Jorge F. Pérez‐Quezada, Claire L. Phillips, Richard P. Phillips, James W. Raich, Alexandre A. Renchon, Nadine K. Ruehr, Enrique P. Sánchez‐Cañete, Matthew Saunders, K. E. Savage, Marion Schrumpf, Russell L. Scott, Ulli Seibt, Whendee L. Silver, Wu Sun, Daphne Szutu, Kentaro Takagi, Masahiro Takagi, Munemasa Teramoto, Mark G. Tjoelker, Susan Trumbore, Masahito Ueyama, Rodrigo Vargas, R. K. Varner, Joseph Verfaillie, Christoph S. Vogel, Jinsong Wang, G. Winston, Tana E. Wood, Zhenhua Wu, Thomas Wutzler, Jiye Zeng, Tianshan Zha, Quan Zhang, Junliang Zou
Global Change Biology, Volume 26, Issue 12

Globally, soils store two to three times as much carbon as currently resides in the atmosphere, and it is critical to understand how soil greenhouse gas (GHG) emissions and uptake will respond to ongoing climate change. In particular, the soil-to-atmosphere CO2 flux, commonly though imprecisely termed soil respiration (RS ), is one of the largest carbon fluxes in the Earth system. An increasing number of high-frequency RS measurements (typically, from an automated system with hourly sampling) have been made over the last two decades; an increasing number of methane measurements are being made with such systems as well. Such high frequency data are an invaluable resource for understanding GHG fluxes, but lack a central database or repository. Here we describe the lightweight, open-source COSORE (COntinuous SOil REspiration) database and software, that focuses on automated, continuous and long-term GHG flux datasets, and is intended to serve as a community resource for earth sciences, climate change syntheses and model evaluation. Contributed datasets are mapped to a single, consistent standard, with metadata on contributors, geographic location, measurement conditions and ancillary data. The design emphasizes the importance of reproducibility, scientific transparency and open access to data. While being oriented towards continuously measured RS , the database design accommodates other soil-atmosphere measurements (e.g. ecosystem respiration, chamber-measured net ecosystem exchange, methane fluxes) as well as experimental treatments (heterotrophic only, etc.). We give brief examples of the types of analyses possible using this new community resource and describe its accompanying R software package.

Elise Pendall

2021

2020

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