Lisa Wingate


2021

DOI bib
Global transpiration data from sap flow measurements: the SAPFLUXNET database
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos Pereira Marinho Aidar, Scott T. Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson‐Teixeira, L. M. T. Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert C. Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, B. Blakely, Johnny L. Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, César Cisneros Vaca, Kenneth L. Clark, Edoardo Cremonese, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frédéric Chauvaud, Michal Dohnal, Jean‐Christophe Domec, Sebinasi Dzikiti, C. Edgar, Rebekka Eichstaedt, Tarek S. El‐Madany, J.A. Elbers, Cleiton B. Eller, Eugénie Euskirchen, B. E. Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar García-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, J. P. Grace, André Granier, Anne Griebel, Guangyu Yang, Mark B Gush, P. J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernández‐Santana, Valentine Herrmann, Teemu Hölttä, F. Holwerda, Hongzhong Dang, J. E. Irvine, Supat Isarangkool Na Ayutthaya, P. G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun‐Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean‐Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, A. Lindroth, Pilar Llorens, Álvaro López-Bernal, M. M. Loranty, Dietmar Lüttschwager, Cate Macinnis‐Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley M. Matheny, Nate G. McDowell, Sean M. McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick J. Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, R. J. Norby, Kimberly A. Novick, Walter Oberhuber, Nikolaus Obojes, Christopher A. Oishi, Rafael S. Oliveira, Ram Oren, Jean‐Marc Ourcival, Teemu Paljakka, Óscar Pérez-Priego, Pablo Luís Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine G. Rascher, George R. Robinson, Humberto Ribeiro da Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, A. V. Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor‐ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey M. Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan D. Wullschleger, K. Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, Jordi Martínez‐Vilalta
Earth System Science Data, Volume 13, Issue 6

Abstract. Plant transpiration links physiological responses of vegetation to water supply and demand with hydrological, energy, and carbon budgets at the land–atmosphere interface. However, despite being the main land evaporative flux at the global scale, transpiration and its response to environmental drivers are currently not well constrained by observations. Here we introduce the first global compilation of whole-plant transpiration data from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021). We harmonized and quality-controlled individual datasets supplied by contributors worldwide in a semi-automatic data workflow implemented in the R programming language. Datasets include sub-daily time series of sap flow and hydrometeorological drivers for one or more growing seasons, as well as metadata on the stand characteristics, plant attributes, and technical details of the measurements. SAPFLUXNET contains 202 globally distributed datasets with sap flow time series for 2714 plants, mostly trees, of 174 species. SAPFLUXNET has a broad bioclimatic coverage, with woodland/shrubland and temperate forest biomes especially well represented (80 % of the datasets). The measurements cover a wide variety of stand structural characteristics and plant sizes. The datasets encompass the period between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data are available for most of the datasets, while on-site soil water content is available for 56 % of the datasets. Many datasets contain data for species that make up 90 % or more of the total stand basal area, allowing the estimation of stand transpiration in diverse ecological settings. SAPFLUXNET adds to existing plant trait datasets, ecosystem flux networks, and remote sensing products to help increase our understanding of plant water use, plant responses to drought, and ecohydrological processes. SAPFLUXNET version 0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The “sapfluxnetr” R package – designed to access, visualize, and process SAPFLUXNET data – is available from CRAN.

2018

DOI bib
Towards long-term standardised carbon and greenhouse gas observations for monitoring Europe’s terrestrial ecosystems: a review
Daniela Franz, Manuel Acosta, Núria Altimir, Nicola Arriga, Dominique Arrouays, Marc Aubinet, Mika Aurela, Edward Ayres, Ana López‐Ballesteros, Mireille Barbaste, Daniel Berveiller, Sébastien Biraud, Hakima Boukir, Thomas S. Brown, Christian Brümmer, Nina Buchmann, George Burba, Arnaud Carrara, A. Cescatti, Éric Ceschia, Robert Clement, Edoardo Cremonese, Patrick Crill, Eva Dařenová, Sigrid Dengel, Petra D’Odorico, Gianluca Filippa, Stefan Fleck, Gerardo Fratini, Roland Fuß, Bert Gielen, Sébastien Gogo, J. Grace, Alexander Graf, Achim Grelle, Patrick Gross, Thomas Grünwald, Sami Haapanala, Markus Hehn, Bernard Heinesch, Jouni Heiskanen, Mathias Herbst, Christine Herschlein, Lukas Hörtnagl, Koen Hufkens, Andreas Ibrom, Claudy Jolivet, Lilian Joly, Michael B. Jones, Ralf Kiese, Leif Klemedtsson, Natascha Kljun, Katja Klumpp, Pasi Kolari, Olaf Kolle, Andrew S. Kowalski, Werner L. Kutsch, Tuomas Laurila, Anne De Ligne, Sune Linder, Anders Lindroth, Annalea Lohila, Bernhard Longdoz, Ivan Mammarella, Tanguy Manise, Sara Marañón-Jiménez, Giorgio Matteucci, Matthias Mauder, Philip Meier, Lutz Merbold, Simone Mereu, Stefan Metzger, Mirco Migliavacca, Meelis Mölder, Leonardo Montagnani, Christine Moureaux, David D. Nelson, Eiko Nemitz, Giacomo Nicolini, Mats Nilsson, Maarten Op de Beeck, Bruce Osborne, Mikaell Ottosson Löfvenius, Marián Pavelka, Matthias Peichl, Olli Peltola, Mari Pihlatie, Andrea Pitacco, Radek Pokorný, Jukka Pumpanen, Céline Ratié, Corinna Rebmann, Marilyn Roland, Simone Sabbatini, Nicolas Saby, Matthew Saunders, Hans Peter Schmid, Marion Schrumpf, Pavel Sedlák, Penélope Serrano-Ortiz, Lukas Siebicke, Ladislav Šigut, Hanna Silvennoinen, Guillaume Simioni, Ute Skiba, Oliver Sonnentag, Kamel Soudani, Patrice Soulé, R. Steinbrecher, Tiphaine Tallec, Anne Thimonier, Eeva‐Stiina Tuittila, Juha‐Pekka Tuovinen, Patrik Vestin, Gaëlle Vincent, Caroline Vincke, Domenico Vitale, Peter Waldner, Per Weslien, Lisa Wingate, Georg Wohlfahrt, M. S. Zahniser, Timo Vesala
International Agrophysics, Volume 32, Issue 4

Abstract Research infrastructures play a key role in launching a new generation of integrated long-term, geographically distributed observation programmes designed to monitor climate change, better understand its impacts on global ecosystems, and evaluate possible mitigation and adaptation strategies. The pan-European Integrated Carbon Observation System combines carbon and greenhouse gas (GHG; CO 2 , CH 4 , N 2 O, H 2 O) observations within the atmosphere, terrestrial ecosystems and oceans. High-precision measurements are obtained using standardised methodologies, are centrally processed and openly available in a traceable and verifiable fashion in combination with detailed metadata. The Integrated Carbon Observation System ecosystem station network aims to sample climate and land-cover variability across Europe. In addition to GHG flux measurements, a large set of complementary data (including management practices, vegetation and soil characteristics) is collected to support the interpretation, spatial upscaling and modelling of observed ecosystem carbon and GHG dynamics. The applied sampling design was developed and formulated in protocols by the scientific community, representing a trade-off between an ideal dataset and practical feasibility. The use of open-access, high-quality and multi-level data products by different user communities is crucial for the Integrated Carbon Observation System in order to achieve its scientific potential and societal value.
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