Namyi Chae


2022

DOI bib
The ABCflux database: Arctic–boreal CO<sub>2</sub> flux observations and ancillary information aggregated to monthly time steps across terrestrial ecosystems
Anna‐Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, K. E. Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, D. L. Peter, Christina Minions, Julia Nojeim, R. Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrèn López‐Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans‐Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret‐Harte, Sigrid Dengel, A. J. Dolman, Colin W. Edgar, Bo Elberling, E. S. Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang‐Jong Park, Roman Petrov, Anatoly Prokushkin, Christopher Schulze, Vincent L. St. Louis, Eeva‐Stiina Tuittila, Juha‐Pekka Tuovinen, W. L. Quinton, Andrej Varlagin, Donatella Zona, Viacheslav I. Zyryanov
Earth System Science Data, Volume 14, Issue 1

Abstract. Past efforts to synthesize and quantify the magnitude and change in carbon dioxide (CO2) fluxes in terrestrial ecosystems across the rapidly warming Arctic–boreal zone (ABZ) have provided valuable information but were limited in their geographical and temporal coverage. Furthermore, these efforts have been based on data aggregated over varying time periods, often with only minimal site ancillary data, thus limiting their potential to be used in large-scale carbon budget assessments. To bridge these gaps, we developed a standardized monthly database of Arctic–boreal CO2 fluxes (ABCflux) that aggregates in situ measurements of terrestrial net ecosystem CO2 exchange and its derived partitioned component fluxes: gross primary productivity and ecosystem respiration. The data span from 1989 to 2020 with over 70 supporting variables that describe key site conditions (e.g., vegetation and disturbance type), micrometeorological and environmental measurements (e.g., air and soil temperatures), and flux measurement techniques. Here, we describe these variables, the spatial and temporal distribution of observations, the main strengths and limitations of the database, and the potential research opportunities it enables. In total, ABCflux includes 244 sites and 6309 monthly observations; 136 sites and 2217 monthly observations represent tundra, and 108 sites and 4092 observations represent the boreal biome. The database includes fluxes estimated with chamber (19 % of the monthly observations), snow diffusion (3 %) and eddy covariance (78 %) techniques. The largest number of observations were collected during the climatological summer (June–August; 32 %), and fewer observations were available for autumn (September–October; 25 %), winter (December–February; 18 %), and spring (March–May; 25 %). ABCflux can be used in a wide array of empirical, remote sensing and modeling studies to improve understanding of the regional and temporal variability in CO2 fluxes and to better estimate the terrestrial ABZ CO2 budget. ABCflux is openly and freely available online (Virkkala et al., 2021b, https://doi.org/10.3334/ORNLDAAC/1934).

2021

DOI bib
Statistical upscaling of ecosystem CO <sub>2</sub> fluxes across the terrestrial tundra and boreal domain: Regional patterns and uncertainties
Anna‐Maria Virkkala, Juha Aalto, Brendan M. Rogers, Torbern Tagesson, Claire C. Treat, Susan M. Natali, Jennifer D. Watts, Stefano Potter, Aleksi Lehtonen, Marguerite Mauritz, Edward A. G. Schuur, John Kochendorfer, Donatella Zona, Walter C. Oechel, Hideki Kobayashi, Elyn Humphreys, Mathias Goeckede, Hiroki Iwata, Peter M. Lafleur, E. S. Euskirchen, Stef Bokhorst, Maija E. Marushchak, Pertti J. Martikainen, Bo Elberling, Carolina Voigt, Christina Biasi, Oliver Sonnentag, Frans‐Jan W. Parmentier, Masahito Ueyama, Gerardo Celis, Vincent L. St. Louis, Craig A. Emmerton, Matthias Peichl, Jinshu Chi, Järvi Järveoja, Mats B. Nilsson, Steven F. Oberbauer, Margaret Torn, Sang‐Jong Park, A. J. Dolman, Ivan Mammarella, Namyi Chae, Rafael Poyatos, Efrèn López‐Blanco, Torben R. Christensen, Min Jung Kwon, Torsten Sachs, David Holl, Miska Luoto, Anna‐Maria Virkkala, Juha Aalto, Brendan M. Rogers, Torbern Tagesson, Claire C. Treat, Susan M. Natali, Jennifer D. Watts, Stefano Potter, Aleksi Lehtonen, Marguerite Mauritz, Edward A. G. Schuur, John Kochendorfer, Donatella Zona, Walter C. Oechel, Hideki Kobayashi, Elyn Humphreys, Mathias Goeckede, Hiroki Iwata, Peter M. Lafleur, E. S. Euskirchen, Stef Bokhorst, Maija E. Marushchak, Pertti J. Martikainen, Bo Elberling, Carolina Voigt, Christina Biasi, Oliver Sonnentag, Frans‐Jan W. Parmentier, Masahito Ueyama, Gerardo Celis, Vincent L. St. Louis, Craig A. Emmerton, Matthias Peichl, Jinshu Chi, Järvi Järveoja, Mats B. Nilsson, Steven F. Oberbauer, Margaret Torn, Sang‐Jong Park, A. J. Dolman, Ivan Mammarella, Namyi Chae, Rafael Poyatos, Efrèn López‐Blanco, Torben R. Christensen, Min Jung Kwon, Torsten Sachs, David Holl, Miska Luoto
Global Change Biology, Volume 27, Issue 17

The regional variability in tundra and boreal carbon dioxide (CO2) fluxes can be high, complicating efforts to quantify sink-source patterns across the entire region. Statistical models are increasingly used to predict (i.e., upscale) CO2 fluxes across large spatial domains, but the reliability of different modeling techniques, each with different specifications and assumptions, has not been assessed in detail. Here, we compile eddy covariance and chamber measurements of annual and growing season CO2 fluxes of gross primary productivity (GPP), ecosystem respiration (ER), and net ecosystem exchange (NEE) during 1990–2015 from 148 terrestrial high-latitude (i.e., tundra and boreal) sites to analyze the spatial patterns and drivers of CO2 fluxes and test the accuracy and uncertainty of different statistical models. CO2 fluxes were upscaled at relatively high spatial resolution (1 km2) across the high-latitude region using five commonly used statistical models and their ensemble, that is, the median of all five models, using climatic, vegetation, and soil predictors. We found the performance of machine learning and ensemble predictions to outperform traditional regression methods. We also found the predictive performance of NEE-focused models to be low, relative to models predicting GPP and ER. Our data compilation and ensemble predictions showed that CO2 sink strength was larger in the boreal biome (observed and predicted average annual NEE −46 and −29 g C m−2 yr−1, respectively) compared to tundra (average annual NEE +10 and −2 g C m−2 yr−1). This pattern was associated with large spatial variability, reflecting local heterogeneity in soil organic carbon stocks, climate, and vegetation productivity. The terrestrial ecosystem CO2 budget, estimated using the annual NEE ensemble prediction, suggests the high-latitude region was on average an annual CO2 sink during 1990–2015, although uncertainty remains high.

DOI bib
Statistical upscaling of ecosystem CO <sub>2</sub> fluxes across the terrestrial tundra and boreal domain: Regional patterns and uncertainties
Anna‐Maria Virkkala, Juha Aalto, Brendan M. Rogers, Torbern Tagesson, Claire C. Treat, Susan M. Natali, Jennifer D. Watts, Stefano Potter, Aleksi Lehtonen, Marguerite Mauritz, Edward A. G. Schuur, John Kochendorfer, Donatella Zona, Walter C. Oechel, Hideki Kobayashi, Elyn Humphreys, Mathias Goeckede, Hiroki Iwata, Peter M. Lafleur, E. S. Euskirchen, Stef Bokhorst, Maija E. Marushchak, Pertti J. Martikainen, Bo Elberling, Carolina Voigt, Christina Biasi, Oliver Sonnentag, Frans‐Jan W. Parmentier, Masahito Ueyama, Gerardo Celis, Vincent L. St. Louis, Craig A. Emmerton, Matthias Peichl, Jinshu Chi, Järvi Järveoja, Mats B. Nilsson, Steven F. Oberbauer, Margaret Torn, Sang‐Jong Park, A. J. Dolman, Ivan Mammarella, Namyi Chae, Rafael Poyatos, Efrèn López‐Blanco, Torben R. Christensen, Min Jung Kwon, Torsten Sachs, David Holl, Miska Luoto, Anna‐Maria Virkkala, Juha Aalto, Brendan M. Rogers, Torbern Tagesson, Claire C. Treat, Susan M. Natali, Jennifer D. Watts, Stefano Potter, Aleksi Lehtonen, Marguerite Mauritz, Edward A. G. Schuur, John Kochendorfer, Donatella Zona, Walter C. Oechel, Hideki Kobayashi, Elyn Humphreys, Mathias Goeckede, Hiroki Iwata, Peter M. Lafleur, E. S. Euskirchen, Stef Bokhorst, Maija E. Marushchak, Pertti J. Martikainen, Bo Elberling, Carolina Voigt, Christina Biasi, Oliver Sonnentag, Frans‐Jan W. Parmentier, Masahito Ueyama, Gerardo Celis, Vincent L. St. Louis, Craig A. Emmerton, Matthias Peichl, Jinshu Chi, Järvi Järveoja, Mats B. Nilsson, Steven F. Oberbauer, Margaret Torn, Sang‐Jong Park, A. J. Dolman, Ivan Mammarella, Namyi Chae, Rafael Poyatos, Efrèn López‐Blanco, Torben R. Christensen, Min Jung Kwon, Torsten Sachs, David Holl, Miska Luoto
Global Change Biology, Volume 27, Issue 17

The regional variability in tundra and boreal carbon dioxide (CO2) fluxes can be high, complicating efforts to quantify sink-source patterns across the entire region. Statistical models are increasingly used to predict (i.e., upscale) CO2 fluxes across large spatial domains, but the reliability of different modeling techniques, each with different specifications and assumptions, has not been assessed in detail. Here, we compile eddy covariance and chamber measurements of annual and growing season CO2 fluxes of gross primary productivity (GPP), ecosystem respiration (ER), and net ecosystem exchange (NEE) during 1990–2015 from 148 terrestrial high-latitude (i.e., tundra and boreal) sites to analyze the spatial patterns and drivers of CO2 fluxes and test the accuracy and uncertainty of different statistical models. CO2 fluxes were upscaled at relatively high spatial resolution (1 km2) across the high-latitude region using five commonly used statistical models and their ensemble, that is, the median of all five models, using climatic, vegetation, and soil predictors. We found the performance of machine learning and ensemble predictions to outperform traditional regression methods. We also found the predictive performance of NEE-focused models to be low, relative to models predicting GPP and ER. Our data compilation and ensemble predictions showed that CO2 sink strength was larger in the boreal biome (observed and predicted average annual NEE −46 and −29 g C m−2 yr−1, respectively) compared to tundra (average annual NEE +10 and −2 g C m−2 yr−1). This pattern was associated with large spatial variability, reflecting local heterogeneity in soil organic carbon stocks, climate, and vegetation productivity. The terrestrial ecosystem CO2 budget, estimated using the annual NEE ensemble prediction, suggests the high-latitude region was on average an annual CO2 sink during 1990–2015, although uncertainty remains high.